Difference between revisions of "This page"

From medicin.ncmm.IT
Jump to: navigation, search
(List of modules maintained in our production Python versions)
(List of modules maintained in our production Python versions)
Line 2: Line 2:
 
== '''List of modules maintained in our production Python versions''' ==
 
== '''List of modules maintained in our production Python versions''' ==
  
The following table provides a list of all supported/maintained Python module versions, per Python version.
+
The following table provides a list of all supported/maintained Python module versions, per Python version. The table concerns the biotin{2,3}.hpc.uio.no production servers.  
 
{| class="wikitable"
 
{| class="wikitable"
 
!Library/module
 
!Library/module
Line 33: Line 33:
 
|1.69
 
|1.69
 
|1.74
 
|1.74
 +
|-
 +
|intervene
 +
|
 +
|0.6.2
 +
|0.6.4
 +
|-
 +
|kipoi
 +
|
 +
|0.2.9
 +
| -
 
|-
 
|-
 
|patsy
 
|patsy
Line 61: Line 71:
 
|snakemake
 
|snakemake
 
|
 
|
|
+
|5.5.4
 
|5.5.4
 
|5.5.4
 
|-
 
|-
 
|deepTools
 
|deepTools
 
|
 
|
|
+
|2.5.3_2
 
|3.3.0
 
|3.3.0
 
|-
 
|-
 
|htseq
 
|htseq
 
|
 
|
|
+
|0.8.0
 
|0.11.2
 
|0.11.2
 
|-
 
|-
 
|seaborn
 
|seaborn
 
|
 
|
|
+
|0.8.0
 
|0.9.0
 
|0.9.0
 
|-
 
|-
 
|statsmodels
 
|statsmodels
 
|
 
|
|
+
|0.8.0
 
|0.10.1
 
|0.10.1
 
|-
 
|-
 +
|xgboost
 
|
 
|
|
+
|0.60
|
+
|0.90
|
 
 
|}
 
|}

Revision as of 19:19, 14 August 2019

List of modules maintained in our production Python versions

The following table provides a list of all supported/maintained Python module versions, per Python version. The table concerns the biotin{2,3}.hpc.uio.no production servers.

Library/module Python 2.7 Python 3.5.1 Python 3.6.3
numpy 1.14.0 1.17.0
scipy 1.0.0 1.3.0
matplotlib 2.0.2 3.1.1
pandas 0.20.2 0.25.0
biopython 1.69 1.74
intervene 0.6.2 0.6.4
kipoi 0.2.9 -
patsy 0.4.1 0.5.1
python-dateutil 1.11.0
pyparsing 2.4.2
pybedtools 0.7.9 0.8.0
pybigwig 0.3.4 0.3.17
snakemake 5.5.4 5.5.4
deepTools 2.5.3_2 3.3.0
htseq 0.8.0 0.11.2
seaborn 0.8.0 0.9.0
statsmodels 0.8.0 0.10.1
xgboost 0.60 0.90