Difference between revisions of "This page"
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(→List of modules maintained in our production Python versions) (Tag: Visual edit) |
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|3.1.1 | |3.1.1 | ||
|- | |- | ||
| − | |pandas | + | |[https://pandas.pydata.org/ pandas] |
|0.22.0 | |0.22.0 | ||
|0.20.2 | |0.20.2 | ||
|0.25.0 | |0.25.0 | ||
|- | |- | ||
| − | |biopython | + | |[https://biopython.org/ biopython] |
|1.71 | |1.71 | ||
|1.69 | |1.69 | ||
|1.74 | |1.74 | ||
|- | |- | ||
| − | |intervene | + | |[https://intervene.readthedocs.io/en/latest/ intervene] |
|0.6.2 | |0.6.2 | ||
|0.6.2 | |0.6.2 | ||
Revision as of 17:14, 15 August 2019
List of modules maintained in our production Python versions
The following table provides a list of all supported/maintained Python module versions, per Python version. The table concerns the biotin{2,3}.hpc.uio.no production servers.
| Library/module | Python 2.7.5 | Python 3.5.1 | Python 3.6.3 |
|---|---|---|---|
| cython | 0.23.4 | 0.25.2 | 0.29.13 |
| numpy | 1.14.2 | 1.14.0 | 1.17.0 |
| scipy | 1.0.1 | 1.0.0 | 1.3.0 |
| matplotlib | 2.2.2 | 2.0.2 | 3.1.1 |
| pandas | 0.22.0 | 0.20.2 | 0.25.0 |
| biopython | 1.71 | 1.69 | 1.74 |
| intervene | 0.6.2 | 0.6.2 | 0.6.4 |
| kipoi | - | 0.2.9 | - |
| macs2 | 2.1.1 | - | - |
| patsy | 0.4.0 | 0.4.1 | 0.5.1 |
| python-dateutil | 1.11.0 | ||
| pymongo | 3.5.1 | 3.5.0 | 3.5.1 |
| pyparsing | 2.4.2 | ||
| pysam | 0.8.3 | 0.12.0 | 0.15.3 |
| pybedtools | 0.7.9 | 0.7.9 | 0.8.0 |
| pybigwig | - | 0.3.4 | 0.3.17 |
| rpy2 | 2.7.3 | 3.0.5 | |
| snakemake | - | 5.5.4 | 5.5.4 |
| deepTools | 2.4.0_2 | 2.5.3_2 | 3.3.0 |
| htseq | 0.6.1 | 0.8.0 | 0.11.2 |
| seaborn | 0.8.0 | 0.9.0 | |
| statsmodels | 0.6.1 | 0.8.0 | 0.10.1 |
| xgboost | 0.71 | 0.60 | 0.90 |
