Difference between revisions of "Error correction of Illumina reads using Celera Assembler"
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It is usually useful to preprocess the data you have before assembly. There can be several issues with a dataset: | It is usually useful to preprocess the data you have before assembly. There can be several issues with a dataset: | ||
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- adapter sequences | - adapter sequences | ||
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- errors | - errors | ||
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- duplicated reads | - duplicated reads | ||
Revision as of 14:48, 13 June 2013
It is usually useful to preprocess the data you have before assembly. There can be several issues with a dataset:
- adapter sequences
- errors
- duplicated reads
In this how-to, we will remove adapter sequences and errors from a large Illumina dataset.
WORK IN PROGRESS.
