Difference between revisions of "Useful websites with Unix commands"
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| + | == The basics == | ||
An A-Z Index of the Bash command line for Unix. All the commands with a little extra information.<br> | An A-Z Index of the Bash command line for Unix. All the commands with a little extra information.<br> | ||
[http://www.ss64.com/bash/ http://www.ss64.com/bash/]<br> | [http://www.ss64.com/bash/ http://www.ss64.com/bash/]<br> | ||
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| + | Unix/Linux Command Cheat Sheet (print out and hang next to your screen) <br>[[Unix/Linux Command Cheat Sheet http://fosswire.com/post/2007/08/unixlinux-command-cheat-sheet/|http://fosswire.com/post/2007/08/unixlinux-command-cheat-sheet/ ]]<br> | ||
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| + | Have your shell command explained:<br>[http://explainshell.com/ http://explainshell.com/]<br> | ||
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UNIX tips: Learn 10 good UNIX usage habits[http://www.ibm.com/developerworks/aix/library/au-badunixhabits.html#one <br>] | UNIX tips: Learn 10 good UNIX usage habits[http://www.ibm.com/developerworks/aix/library/au-badunixhabits.html#one <br>] | ||
| − | [http://www.ibm.com/developerworks/aix/library/au-badunixhabits.html#one http://www.ibm.com/developerworks/aix/library/au-badunixhabits.html#one]<br> | + | [http://www.ibm.com/developerworks/aix/library/au-badunixhabits.html#one http://www.ibm.com/developerworks/aix/library/au-badunixhabits.html#one]<br> |
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| + | A linux command line reference for common operations:<br>[http://www.pixelbeat.org/cmdline.html http://www.pixelbeat.org/cmdline.html ]<br> | ||
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| + | == Learning unix<br> == | ||
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| + | Learning unix, material from Software Carpentry:<br>[http://software-carpentry.org/v4/shell/index.html http://software-carpentry.org/v4/shell/index.html] | ||
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| + | Other useful material from Software Carpentry:<br>[http://software-carpentry.org/v4/index.html http://software-carpentry.org/v4/index.html] | ||
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| + | Useful tutorials from 'The Geek Stuff'<br>[http://www.thegeekstuff.com/best-of-the-blog/ http://www.thegeekstuff.com/best-of-the-blog/] | ||
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| + | == Tricks and more<br> == | ||
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| + | Generate your .bashrc PS1 prompt easily with a drag and drop interface<br>[http://bashrcgenerator.com/ http://bashrcgenerator.com/]<br> | ||
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| + | Cheat sheet for one-based vs zero-based coordinate systems<br>[http://www.biostars.org/p/84686/ http://www.biostars.org/p/84686/] | ||
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| + | Bash Shortcuts For Maximum Productivity<br>[http://www.skorks.com/2009/09/bash-shortcuts-for-maximum-productivity/ http://www.skorks.com/2009/09/bash-shortcuts-for-maximum-productivity/] | ||
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| + | Using Make for reproducible scientific analyses<br>[http://www.bendmorris.com/2013/09/using-make-for-reproducible-scientific.html http://www.bendmorris.com/2013/09/using-make-for-reproducible-scientific.html]<br> | ||
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| + | <u>More advanced:</u><br>Testing exit values in Bash<br>[http://blog.sanctum.geek.nz/testing-exit-values-bash/ http://blog.sanctum.geek.nz/testing-exit-values-bash/] | ||
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| + | Bash process substitution<br>[http://blog.sanctum.geek.nz/bash-process-substitution/ http://blog.sanctum.geek.nz/bash-process-substitution/]<br> | ||
Revision as of 13:08, 31 October 2013
Here are some useful website with Unix commands
The basics
An A-Z Index of the Bash command line for Unix. All the commands with a little extra information.
Unix/Linux Command Cheat Sheet (print out and hang next to your screen)
http://fosswire.com/post/2007/08/unixlinux-command-cheat-sheet/
Have your shell command explained:
http://explainshell.com/
A Bioinformatician's UNIX Toolbox
http://lh3lh3.users.sourceforge.net/biounix.shtml
Bioinformatics one-liners
https://github.com/stephenturner/oneliners
UNIX tips: Learn 10 good UNIX usage habits
http://www.ibm.com/developerworks/aix/library/au-badunixhabits.html#one
A linux command line reference for common operations:
http://www.pixelbeat.org/cmdline.html
Learning unix
Learning unix, material from Software Carpentry:
http://software-carpentry.org/v4/shell/index.html
Other useful material from Software Carpentry:
http://software-carpentry.org/v4/index.html
Useful tutorials from 'The Geek Stuff'
http://www.thegeekstuff.com/best-of-the-blog/
Tricks and more
Generate your .bashrc PS1 prompt easily with a drag and drop interface
http://bashrcgenerator.com/
Cheat sheet for one-based vs zero-based coordinate systems
http://www.biostars.org/p/84686/
Bash Shortcuts For Maximum Productivity
http://www.skorks.com/2009/09/bash-shortcuts-for-maximum-productivity/
Using Make for reproducible scientific analyses
http://www.bendmorris.com/2013/09/using-make-for-reproducible-scientific.html
More advanced:
Testing exit values in Bash
http://blog.sanctum.geek.nz/testing-exit-values-bash/
Bash process substitution
http://blog.sanctum.geek.nz/bash-process-substitution/
