Difference between revisions of "8. Retrieve historical ECMWF fields (ERA40) for FLEXPART"
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4) The files that need editing is: | 4) The files that need editing is: | ||
− | '''seq_control.V4''' -executes seq_extract.V4 for the dates you put in. | + | seq_extract.V4 edit path |
+ | |||
+ | '''seq_control.V4''' -executes seq_extract.V4 for the dates you put in.-Edit dates and path | ||
+ | |||
''./seq_extract.V4 1990 1990 06 06 20 31 1'' | ''./seq_extract.V4 1990 1990 06 06 20 31 1'' | ||
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- line 1592 edit path: echo "Finished Job" > /home/ms/no/'''sb1d'''/flex_extract_ecgate_V4/finished.PID | - line 1592 edit path: echo "Finished Job" > /home/ms/no/'''sb1d'''/flex_extract_ecgate_V4/finished.PID | ||
− | + | submit edit path | |
5) cp '''flex_ecmwf_91_global_ecgate_ERA-40''' extract_ecmwf_ftpbase | 5) cp '''flex_ecmwf_91_global_ecgate_ERA-40''' extract_ecmwf_ftpbase | ||
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6) Start the job by ./submit | 6) Start the job by ./submit | ||
+ | 7) Check your job: | ||
+ | llq to see your job in the queue | ||
+ | eoj <jobid> provides details on the performance of a running job. (also automatically provided at end of job) | ||
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8) The retrieved files are automatically transferred to your ecgate account (via ECTRANS) and then to NILU by ftp. (NB: cannot ftp directly from HPCE, but must go via ecgate). If you can’t find your files in your defined NILU-directory, check the directory you specified in flex_ecmwf_91_finegrid_* (ECFSDIR) for where it is temporarily stored on the ECWMF system. Then try ftp it over again using the ftp commands specified previously. | 8) The retrieved files are automatically transferred to your ecgate account (via ECTRANS) and then to NILU by ftp. (NB: cannot ftp directly from HPCE, but must go via ecgate). If you can’t find your files in your defined NILU-directory, check the directory you specified in flex_ecmwf_91_finegrid_* (ECFSDIR) for where it is temporarily stored on the ECWMF system. Then try ftp it over again using the ftp commands specified previously. |
Revision as of 15:10, 26 October 2012
Retrieving ECMWF historcal grid data (example for ERA_40):
1) Make sure your ECtrans setup settings on: https://ecaccess.ecmwf.int/ is valid.
2) When ssh'ing onto username@eceaccess.ecmwf.int Choose: ecgate
3) The files you need to extract ERA_40can be found e.g. /home/ms/no/sb1d/flex_extract_ecgate_V4, copy this directory.
4) The files that need editing is:
seq_extract.V4 edit path
seq_control.V4 -executes seq_extract.V4 for the dates you put in.-Edit dates and path
./seq_extract.V4 1990 1990 06 06 20 31 1
-start_year end_year start_month end_month start_day end_day 1=complete day(s)
flex_ecmwf_91_global_ecgate_ERA-40
- line 1592 edit path: echo "Finished Job" > /home/ms/no/sb1d/flex_extract_ecgate_V4/finished.PID submit edit path
5) cp flex_ecmwf_91_global_ecgate_ERA-40 extract_ecmwf_ftpbase
6) Start the job by ./submit
7) Check your job: llq to see your job in the queue eoj <jobid> provides details on the performance of a running job. (also automatically provided at end of job)
8) The retrieved files are automatically transferred to your ecgate account (via ECTRANS) and then to NILU by ftp. (NB: cannot ftp directly from HPCE, but must go via ecgate). If you can’t find your files in your defined NILU-directory, check the directory you specified in flex_ecmwf_91_finegrid_* (ECFSDIR) for where it is temporarily stored on the ECWMF system. Then try ftp it over again using the ftp commands specified previously.
% Choose c1a (not ecgate) upon login to access the supercomputer facility (HPCE)
%List of files: %flex_ecmwf_91_finegrid_* %extract_ecmwf_ftpbase %seq_extract.V4* %seq_control.V4* %submit*
%1. Edit the times in the file: seq_control.V4* %./seq_extract.V4 1990 1990 06 06 29 29 1
2. In file flex_ecmwf_91_finegrid_* modify the following parameters:
M_GRID 20 (resolution 0.2 deg, for resolution of e.g. 10 deg use 1000)
M_LEFT -3600 (36 W)
M_LOWER 4000 (40 N)
M_UPPER 7600 (76 N)
M_RIGHT 3600 (36 E)
M_FORMAT GRIB2 (GRIB1 or GRIB2)
DESTINATION nina (or another MS association set up on the web interface, e.g flexpart)
ECFSDIR ectmp:/${USER}/GRIM/ (directory name)
SOURCECODE /home/ms/no/sb9/flex_extract_ecgate_V4 (your username)
3. Change all paths to refer to your own user grep sb9 * to list all files containing the path with user sb9 which need to be changed.
4. Copy the template file flex_ecmwf_91_finegrid_* to extract_ecmwf_ftpbase
5. Run the job:
./submit
7. Get your files: