Difference between revisions of "INF-BIOX121 H14 course material"
From projects/clsi
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[https://wiki.uio.no/projects/clsi/images/3/32/HTS_2014_Intro_Galaxy_Lifeportal.pdf HTS_2014_Intro_Galaxy_Lifeportal.pdf] | [https://wiki.uio.no/projects/clsi/images/3/32/HTS_2014_Intro_Galaxy_Lifeportal.pdf HTS_2014_Intro_Galaxy_Lifeportal.pdf] | ||
− | [https://wiki.uio.no/projects/clsi/images/2/2f/HTS_2014_miRNA_analysis_Lifeportal_14_final.pdf | + | [https://wiki.uio.no/projects/clsi/images/2/2f/HTS_2014_miRNA_analysis_Lifeportal_14_final.pdf HTS_2014_miRNA_analysis_Lifeportal_14_final.pdf] |
== De novo assembly == | == De novo assembly == |
Revision as of 12:02, 7 October 2014
Contents
Introduction
HTS_2014_SequencingTech&Applic_Meza-Zepeda.pdf
File formats
HTS_2014_Day01_File_formats.pdf
HTS_2014_Day01_File_formats-exercises.pdf
Quality control
Fastqc manual: http://www.bioinformatics.babraham.ac.uk/projects/fastqc/Help/
Some more information on 'duplication levels': [1]
miRNA
HTS_2014__microRNA_theory_IB_14.pdf
HTS_2014_Intro_Galaxy_Lifeportal.pdf
HTS_2014_miRNA_analysis_Lifeportal_14_final.pdf