Difference between revisions of "INF-BIOX121 H14 course material"
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Lex Nederbragt: [https://wiki.uio.no/projects/clsi/images/7/75/141014_Thoughts_on_reproducibility_INF_BIOx121.pptx.pdf Thoughts on reproducibility] | Lex Nederbragt: [https://wiki.uio.no/projects/clsi/images/7/75/141014_Thoughts_on_reproducibility_INF_BIOx121.pptx.pdf Thoughts on reproducibility] | ||
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| + | Jon Lærdahl: Oslo Bioinformatics Core Facility & Elixir Noway | ||
== RNAseq == | == RNAseq == | ||
Revision as of 14:37, 14 October 2014
Contents
Introduction
HTS_2014_SequencingTech&Applic_Meza-Zepeda.pdf
File formats
HTS_2014_Day01_File_formats.pdf
HTS_2014_Day01_File_formats-exercises.pdf
Quality control
Fastqc manual: http://www.bioinformatics.babraham.ac.uk/projects/fastqc/Help/
Some more information on 'duplication levels': [1]
miRNA
HTS_2014__microRNA_theory_IB_14.pdf
HTS_2014_Intro_Galaxy_Lifeportal.pdf
HTS_2014_miRNA_analysis_Lifeportal_14_final.pdf
De novo assembly
How to become an efficient bioinformatician
Lex Nederbragt: Thoughts on reproducibility
Jon Lærdahl: Oslo Bioinformatics Core Facility & Elixir Noway
