Difference between revisions of "INF-BIOX120 H13 curriculum"
From projects/clsi
(Changed formatting) |
(Adding suggested reading) |
||
| Line 1: | Line 1: | ||
| + | == Required curriculum for credit students == | ||
| + | |||
The curriculum consists of these four papers: | The curriculum consists of these four papers: | ||
| − | Metzker, ML <br>Nat Rev Genet. 2010 Jan;11(1):31-46 <br>[http://www.ncbi.nlm.nih.gov/pubmed/19997069 Sequencing technologies - the next generation.] | + | Metzker, ML <br>Nat Rev Genet. 2010 Jan;11(1):31-46 <br>[http://www.ncbi.nlm.nih.gov/pubmed/19997069 Sequencing technologies - the next generation.] |
| + | |||
| + | <br> | ||
| + | |||
| + | Nielsen R, Paul JS, Albrechtsen A, Song YS. <br>Nat Rev Genet. 2011 Jun;12(6):443-51 <br>[http://www.ncbi.nlm.nih.gov/pubmed/21587300 Genotype and SNP calling from next-generation sequencing data.] | ||
| + | <br> | ||
| + | Oshlack A, Robinson MD, Young MD. <br>Genome Biol. 2010;11(12):220 <br>[http://www.ncbi.nlm.nih.gov/pubmed/21176179 From RNA-seq reads to differential expression results.] | ||
| − | + | <br> | |
| + | Flicek P, Birney E. <br>Nat Methods. 2009 Nov;6 <br>[http://www.ncbi.nlm.nih.gov/pubmed/19844229 Sense from sequence reads : methods for alignment and assembly ] | ||
| + | <br> | ||
| − | + | == Suggested reading == | |
| + | === Assembly === | ||
| + | Niranjan Nagarajan & Mihai Pop<br>Nature Reviews Genetics 14, 157-167<br>[http://www.nature.com/nrg/journal/v14/n3/full/nrg3367.html Sequence assembly demystified] | ||
| − | + | <br> | |
Revision as of 13:07, 29 August 2013
Required curriculum for credit students
The curriculum consists of these four papers:
Metzker, ML
Nat Rev Genet. 2010 Jan;11(1):31-46
Sequencing technologies - the next generation.
Nielsen R, Paul JS, Albrechtsen A, Song YS.
Nat Rev Genet. 2011 Jun;12(6):443-51
Genotype and SNP calling from next-generation sequencing data.
Oshlack A, Robinson MD, Young MD.
Genome Biol. 2010;11(12):220
From RNA-seq reads to differential expression results.
Flicek P, Birney E.
Nat Methods. 2009 Nov;6
Sense from sequence reads : methods for alignment and assembly
Suggested reading
Assembly
Niranjan Nagarajan & Mihai Pop
Nature Reviews Genetics 14, 157-167
Sequence assembly demystified
