Difference between revisions of "INF-BIOX121 H14 course material"
From projects/clsi
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== Quality control == | == Quality control == | ||
| − | [[Media: | + | [[Media:HTS 2014 read qc.pdf|Read QC practical]] |
Fastqc manual: [http://www.bioinformatics.babraham.ac.uk/projects/fastqc/Help/ http://www.bioinformatics.babraham.ac.uk/projects/fastqc/Help/] | Fastqc manual: [http://www.bioinformatics.babraham.ac.uk/projects/fastqc/Help/ http://www.bioinformatics.babraham.ac.uk/projects/fastqc/Help/] | ||
| − | Some more information on 'duplication levels': | + | Some more information on 'duplication levels':[https://www.biostars.org/p/107402/ https://www.biostars.org/p/107402/] |
== miRNA == | == miRNA == | ||
Revision as of 14:55, 14 October 2014
Contents
Introduction
HTS_2014_SequencingTech&Applic_Meza-Zepeda.pdf
File formats
HTS_2014_Day01_File_formats.pdf
HTS_2014_Day01_File_formats-exercises.pdf
Quality control
Fastqc manual: http://www.bioinformatics.babraham.ac.uk/projects/fastqc/Help/
Some more information on 'duplication levels':https://www.biostars.org/p/107402/
miRNA
De novo assembly
How to become an efficient bioinformatician
Lex Nederbragt: Thoughts on reproducibility
Jon Lærdahl: Oslo Bioinformatics Core Facility & Elixir Noway
Jon Lærdahl: Bioinformatics resources on the web
