Difference between revisions of "INF-BIOX121 H14 course material"

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Some more information on 'duplication levels': [https://www.biostars.org/p/107402/ [1]]
 
Some more information on 'duplication levels': [https://www.biostars.org/p/107402/ [1]]
  
== Read QC practical ==
+
== <span style="font-size: 12px;">miRNA</span> ==
 
 
== miRNA ==
 
  
 
== De novo assembly ==
 
== De novo assembly ==

Revision as of 12:00, 7 October 2014

Introduction

HTS_2014_SequencingTech&Applic_Meza-Zepeda.pdf

File formats

HTS_2014_Day01_File_formats.pdf

HTS_2014_Day01_File_formats-exercises.pdf

Quality control

HTS_2014_read_qc.pdf

Fastqc manual: http://www.bioinformatics.babraham.ac.uk/projects/fastqc/Help/

Some more information on 'duplication levels': [1]

miRNA

De novo assembly

RNAseq

Variant calling

ChIP-seq

Statistical genomics