INF-BIOX121 H14 course material

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Contents

1 Introduction
2 File formats
3 Quality control
4 Read QC practical
5 miRNA
6 De novo assembly
7 RNAseq
8 Variant calling
9 ChIP-seq
10 Statistical genomics

Introduction

File formats

HTS_2014_Day01_File_formats.pdf

HTS_2014_Day01_File_formats-exercises.pdf

Quality control

HTS_2014_read_qc.pdf

Read QC practical

miRNA

De novo assembly

RNAseq

Variant calling

ChIP-seq

Statistical genomics

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