INF-BIOX121 H14 course material

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Introduction

HTS_2014_SequencingTech&Applic_Meza-Zepeda.pdf

File formats

HTS_2014_Day01_File_formats.pdf

HTS_2014_Day01_File_formats-exercises.pdf

Quality control

HTS_2014_read_qc.pdf

Fastqc manual: [1]

Some more information on 'duplication levels': [2]

Read QC practical

miRNA

De novo assembly

RNAseq

Variant calling

ChIP-seq

Statistical genomics