Difference between revisions of "Atlas naming convention"
From projects.navigator3
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{| class="wikitable" | {| class="wikitable" | ||
!Complete atlas name | !Complete atlas name | ||
| − | !Short atlas name | + | !Short atlas name ⃰ ⃰ |
!URI-friendly atlas name | !URI-friendly atlas name | ||
!N3 ID | !N3 ID | ||
|- | |- | ||
|Allen Mouse Brain Atlas CCF version 2 | |Allen Mouse Brain Atlas CCF version 2 | ||
| − | |ABA Mouse CCFv2 | + | |ABA Mouse CCFv2 |
|ABA_Mouse_CCFv2 | |ABA_Mouse_CCFv2 | ||
|100000 | |100000 | ||
|- | |- | ||
|Allen Mouse Brain Atlas CCF version 3, 2015 | |Allen Mouse Brain Atlas CCF version 3, 2015 | ||
| − | |ABA Mouse CCFv3_2015 | + | |ABA Mouse CCFv3_2015 |
|ABA_Mouse_CCFv3_2015 | |ABA_Mouse_CCFv3_2015 | ||
|300000 | |300000 | ||
|- | |- | ||
|Waxholm Space atlas of the Sprague Dawley rat brain version 2 | |Waxholm Space atlas of the Sprague Dawley rat brain version 2 | ||
| − | |WHS Rat v2 | + | |WHS Rat v2 |
|WHS_Rat_v2 | |WHS_Rat_v2 | ||
|200000 | |200000 | ||
|- | |- | ||
|Allen Mouse Brain Atlas CCF version 3, 2017 | |Allen Mouse Brain Atlas CCF version 3, 2017 | ||
| − | |ABA Mouse CCFv3_2017 | + | |ABA Mouse CCFv3_2017 |
|ABA_Mouse_CCFv3_2017 | |ABA_Mouse_CCFv3_2017 | ||
|300100 | |300100 | ||
|- | |- | ||
|Waxholm Space atlas of the Sprague Dawley rat brain version 3 | |Waxholm Space atlas of the Sprague Dawley rat brain version 3 | ||
| − | |WHS Rat v3 | + | |WHS Rat v3 |
|WHS_Rat_v3 | |WHS_Rat_v3 | ||
|200100 | |200100 | ||
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⃰ CCF is Common Coordinate Framework | ⃰ CCF is Common Coordinate Framework | ||
| + | |||
| + | ⃰ ⃰ Content of anchored_to field | ||
| + | |||
| + | The public copy of this table is here https://wiki.uio.no/projects/navigator3/index.php/Atlas_naming_convention | ||
Latest revision as of 16:55, 30 April 2020
The suggested atlas naming convention
The suggested atlas naming convention is the following:
<ABBREVIATION> <Species> <version>_<year>
Example:
ABA Mouse v3_2017 - Allen Mouse Brain Atlas version 3, 2017
Currently registered atlases
| Complete atlas name | Short atlas name ⃰ ⃰ | URI-friendly atlas name | N3 ID |
|---|---|---|---|
| Allen Mouse Brain Atlas CCF version 2 | ABA Mouse CCFv2 | ABA_Mouse_CCFv2 | 100000 |
| Allen Mouse Brain Atlas CCF version 3, 2015 | ABA Mouse CCFv3_2015 | ABA_Mouse_CCFv3_2015 | 300000 |
| Waxholm Space atlas of the Sprague Dawley rat brain version 2 | WHS Rat v2 | WHS_Rat_v2 | 200000 |
| Allen Mouse Brain Atlas CCF version 3, 2017 | ABA Mouse CCFv3_2017 | ABA_Mouse_CCFv3_2017 | 300100 |
| Waxholm Space atlas of the Sprague Dawley rat brain version 3 | WHS Rat v3 | WHS_Rat_v3 | 200100 |
⃰ CCF is Common Coordinate Framework
⃰ ⃰ Content of anchored_to field
The public copy of this table is here https://wiki.uio.no/projects/navigator3/index.php/Atlas_naming_convention
