Required Software
From mn/geo/geoit
<rst> To aid the IT department, this is a listing of required software packages and libraries that should be installed on the new machines. Please update this as appropriate. . .
- FLEXPART Essential:**
NCARG: currently located: /homevip/flexpart/bin/ncarg http://ngwww.ucar.edu/
NCL: http://www.ncl.ucar.edu/
PyNGL http://www.pyngl.ucar.edu/
GRIB: currently located: /homevip/flexpart/bin http://www.ecmwf.int/products/data/software/grib_api.html
gmeta scripts currently located: /flex_wrk/bin/gmeta
libjasper http://packages.ubuntu.com/hardy/libjasper-dev
- Compilers:**
Absoft http://www.absoft.com/ Do we still need this? Have we tested gfortran yet?
gfortran http://packages.ubuntu.com/hardy-updates/gfortran-4.2-multilib
- Python Numerical Tools:**
python-scipy: can be installed from apt-get
python-matplotlib & Basemap version > 0.98.5 required
other python: python-gdal, python-nose
PYTHONPATH: should include: /flex_wrk/bin/site-packages
Scientific Can use apt-get: python-scientific - Python modules useful for scientific computing python-scientific-doc - Python modules useful for scientific computing
- Viewing/Editing Tools:**
gvim apt-get instal gvim graphical interface for vi
Imagemagick apt-get install imagemagick converting different types of graphical formats (including gmeta)
ufraw apt-get install ufraw raw image tool used by imagemagick
Ghostview /usr/bin/gv apt-get install gv ghostview for viewing ps files
latex ispell xv xpdf dcraw
- Shells:**
bash: /bin/sh ksh: /bin/ksh csh: /bin/csh
zsh: /bin/zsh
Note, currently we're using /flex_wrk but this should be changed to a better location, or we could use /homevip/flexpart but the point is to try and set the paths so they are available from inside and outside. See the attached .bashrc file for flexpart
!`.bashrc`__
__ .bashrc
- Command line tools**
mail/mailx (for sending mail from batch jobs) svn (subversion client)
- Libraries (both 64 and 32 bits)**
libg2c.so.0, cert1.0, libstdc++, libXp.so.6
- Crontabs should be preserved**
- Commercial Software**
Matlab + Matlab Compiler on Oluf Absoft Compiler on Caro and Billy
</rst>
