Paired-end read merging

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Paired-end read merging can be performed with the Paired-End reAd mergeR (PEAR) program, see

https://github.com/xflouris/PEAR

for more information.

In order to use PEAR on Abel, download the 64 bit precompiled program file, unzip it and run the program without arguments to display usage information:

wget http://sco.h-its.org/exelixis/web/software/pear/files/pear-0.9.6-bin-64.tar.gz

tar -xzvf pear-0.9.6-bin-64.tar.gz

./pear-0.9.6-bin-64